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Trying to setup Owncloud 9,

webside frontpage url = example.com
owncloud url for access = example.com/cloud

my frontpage works fine but I am getting 404 errors for owncloud.
suggestions? It needs to be .../ownloud not owncloud.example.com

Can I use rewrite to make it work or am I missing fodler configs?

My configs:

UrlToolkit {
    ToolkitID = ownCloud
    Match ^/data DenyAccess
}

VirtualHost {
	Hostname = www.example.com, example.com
	WebsiteRoot = /var/www/frontpage
        EnforceFirstHostname = yes
        RequireTLS = yes,15552000
      ########################################
    ###live###
    #	StartFile = index.html
    ###backup###
    #	StartFile = backup.html
    ###construction###
    	StartFile = closed.html
      ########################################

	Alias = /.well-known/acme-challenge:/var/www/hiawatha/.well-known/acme-challenge
	#ReverseProxy !^/.well-known/ http://81.4.121.132:80 keep-alive
	TLScertFile = /etc/hiawatha/ssl/XXXX.pem

	#UseGZfile = yes
	CustomHeader = X-Frame-Options: sameorigin
	CustomHeader = Vary: Accept-Encoding
	RandomHeader = 64
	PreventXSS = yes
	PreventCSRF = yes
	PreventSQLi = yes
}
##OwnCloud
VirtualHost {
	Hostname = www.example.com, example.com
	WebsiteRoot = /usr/share/webapps/owncloud
	RequireTLS = yes,15552000	

	StartFile = index.html
	Alias = /cloud:/usr/share/webapps/owncloud

	#Setenv HOME = /usr/share/webapps/owncloud
	#Setenv HTTP_HOME = /usr/share/webapps/owncloud

	#UseGZfile = yes
	CustomHeader = X-Frame-Options: sameorigin
	CustomHeader = Vary: Accept-Encoding
	RandomHeader = 64
	PreventXSS = yes
	PreventCSRF = yes
	PreventSQLi = yes

	UseFastCGI = PHP7
	TimeForCGI = 15
	WebDAVapp = yes
	FollowSymlinks = yes
	AllowDotFiles = yes
	EnablePathInfo = yes

	UseToolkit = ownCloud
}

I looked everywhere but I do not find a single example how to host services in subdirectories.
With nginx it is possible. Hope their is a way for hiawatha too.

Is your ownCloud installation located in /usr/share/webapps/owncloud? If so, why also point WebsiteRoot to it? And why have two virtual hosts with the same hostname?

In the last virtual host, you specified index.html as the start file. I think ownCloud has an index.php. Use that in the virtual host, or use a Directory section for that virtual host.

VirtualHost {
  Hostname = www.example.com
  WebsiteRoot = /var/www/frontpage
  ...
  Alias = /cloud:/usr/share/webapps/owncloud
  UseDirectory = owncloud
}

Directory {
  DirectoryID = owncloud
  Path = /cloud
  StartFile = index.php
}

I think that this will solve most of your issue, but Hiawatha was built with the idea of running a single application in a virtual host. You mentioned not wanting to use a new hostname (owncloud.example.com), but I had that kind of configuring in mind while developing Hiawatha.

I am trying the same here, but errors.

my config is

VirtualHost {
        Hostname = oc9.hanscees.net
        WebsiteRoot = /usr/share/owncloud
        AccessLogfile = /var/www/oc9/logs/access.log
        ErrorLogfile = /var/www/oc9/logs/error.log
        TimeForCGI = 5
        UseFastCGI = PHP5
        UseToolkit = joomla
        StartFile = index.php
        WebDAVapp = yes
#       UseDirectory = static, files
}

Install goes fine, but after that:
192.168.0.2|Sat 19 Mar 2016 22:17:58 +0000|404|1036||GET /index.php/apps/files/ HTTP/1.1|Host: oc9.hanscees.net|Connection: keep-alive|Cache-Control: max-age=0|Accept: text/html,application/xhtml+xml,application/xml;q=0.9,image/webp,*/*;q=0.8|Upgrade-Insecure-Requests: 1|User-Agent: Mozilla/5.0 (Windows NT 6.1; Win64; x64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/49.0.2623.87 Safari/537.36|DNT: 1|Accept-Encoding: gzip, deflate, sdch|Accept-Language: nl-NL,nl;q=0.8,en-US;q=0.6,en;q=0.4

hmm

Try with

EnablePathInfo = yes